Insertion junction: LMJ.RY0402.102341_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.102341
Chromosome:chromosome 6
Location:3798509
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278164 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGTGTTGATGTACTGCGGCGGCTTGAG
Internal bar code:AGGAACCATTTGGTAGACAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:97.588
LEAP-Seq n confirming:2023
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGTGGAAAACGGTTGAC
Suggested primer 2:ATGATACGGCTGTGGACCTC