Insertion junction: LMJ.RY0402.102455_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.102455
Chromosome:chromosome 7
Location:6158102
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g356101 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTAAGTCGGGGCTGTCGTGTCTTGGAGG
Internal bar code:TTGACCAGACGATAGGATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:99.6224
LEAP-Seq n confirming:8179
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTCTCTGTACCGGCAG
Suggested primer 2:GTATGCCTGCCTCTGCTCTC