Insertion junction: LMJ.RY0402.102591_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.102591
Chromosome:chromosome 13
Location:1410419
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGATGTGTGCCGGCTCACCGGCAGCTC
Internal bar code:CGGATCCTTCTCCCGGACAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:99.0405
LEAP-Seq n confirming:5987
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGACAGTGGGTTGAAGGT
Suggested primer 2:TGTACCGAAACGGCACATAA