Insertion junction: LMJ.RY0402.102719_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.102719
Chromosome:chromosome 3
Location:8204416
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGCGGCAAGCGCTCGAGATTGGCGGGC
Internal bar code:TGTCGAGAGAGACTGTACGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1130
LEAP-Seq percent confirming:77.8846
LEAP-Seq n confirming:648
LEAP-Seq n nonconfirming:184
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCTCAACAGCCATCACC
Suggested primer 2:TTCTCCTGACGCAACATCTG