Insertion junction: LMJ.RY0402.102781_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.102781
Chromosome:chromosome 6
Location:3973629
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278194 FAP236 (1 of 3) PF05217 - STOP protein (STOP); Flagellar Associated Protein 236 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGCGATCCCGACTTCCGGACTCAATGT
Internal bar code:ATCTAACGACTATTATGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:99.532
LEAP-Seq n confirming:638
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGGCACGTACCCAAGC
Suggested primer 2:CTCCACCTACACCACCGACT