Insertion junction: LMJ.RY0402.102913_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.102913
Chromosome:chromosome 1
Location:4607951
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g031650 CGLD12 Conserved in the Green Lineage and Diatoms; (1 of 2) PF05637 - galactosyl transferase GMA12/MNN10 family (Glyco_transf_34) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTTGTGGCCCTTCAGTCAGGGCCACTC
Internal bar code:AGAAGGGACCCAAGGTGTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:548
LEAP-Seq percent confirming:76.3014
LEAP-Seq n confirming:1539
LEAP-Seq n nonconfirming:478
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACCAGACACCCACTTT
Suggested primer 2:CCCATCTACCCACATATGCC