Insertion junction: LMJ.RY0402.103316_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.103316
Chromosome:chromosome 4
Location:1184345
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g215600 (1 of 1) PTHR32183:SF6 - THIOCYANATE METHYLTRANSFERASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGACTTACCACAGGAGCTCCCAGCGGT
Internal bar code:GCGTGTCTAAGACAGACATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:99.3065
LEAP-Seq n confirming:6587
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTCCTGGTGGGTATGTC
Suggested primer 2:ACTACTAGCGATAGGCCGCA