Insertion junction: LMJ.RY0402.103365_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.103365
Chromosome:chromosome 13
Location:2008111
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g576740 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAGCTGCAACTGTAGGTTGAGGTGCTG
Internal bar code:GGCCGGCCTGACCCCTCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:668
LEAP-Seq percent confirming:99.6464
LEAP-Seq n confirming:5354
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AACGACGAGGTTATCCATGC
Suggested primer 2:CAGAGCTGCAGGACACAGAG