Insertion junction: LMJ.RY0402.103581_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.103581
Chromosome:chromosome 4
Location:1787861
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g212050 (1 of 2) IPR000104//IPR000253//IPR008984 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // SMAD/FHA domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGGAGGGGAAGGCAGGAAGAGGGGGGT
Internal bar code:GGCTGCTGCGCATCTTGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:402
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGGAAGAACTGAGCATC
Suggested primer 2:GACTTGCTTCCTTGCGTTTC