Insertion junction: LMJ.RY0402.103642_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.103642
Chromosome:chromosome 8
Location:4577369
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g383000 (1 of 1) IPR000104//IPR001471//IPR016177//IPR031112 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGGCAGCTGCCCACCCACCCAAGTCA
Internal bar code:GACGCCCTTTTGATCTTCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:41.3902
LEAP-Seq n confirming:262
LEAP-Seq n nonconfirming:371
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTCCTCATAATGGCTG
Suggested primer 2:CACCATCTCCCACCACTACA