Insertion junction: LMJ.RY0402.103685_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.103685
Chromosome:chromosome 9
Location:2121647
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGTGCTCATTAACGCTTCGACAATGC
Internal bar code:ATTGCGGGAGCAGGGCATATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:98.961
LEAP-Seq n confirming:3429
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAAGTCTCGTAGGGTGC
Suggested primer 2:CAGGTGTGTGTGGTTTCGAC