Insertion junction: LMJ.RY0402.103942_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.103942
Chromosome:chromosome 3
Location:8219775
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTTGGTGCCAGCCAAACCAAGGTTGCC
Internal bar code:AGTTGAGGCTATGTTTGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:675
LEAP-Seq percent confirming:95.9424
LEAP-Seq n confirming:733
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCATCGCACCACCTATT
Suggested primer 2:CCGTAGGCACGTACATGTTG