Insertion junction: LMJ.RY0402.103994_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.103994
Chromosome:chromosome 3
Location:2848980
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g162550 MSN1 methylthioadenosine nucleosidase; (1 of 1) 2.4.2.28//3.2.2.9 - S-methyl-5'-thioadenosine phosphorylase / MTAPase // Adenosylhomocysteine nucleosidase / S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCCCCACCTCCCGCCGGCCAGGCCCAC
Internal bar code:GCTCACTGATCATGTGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:91.954
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAAGTCCCAAATGTAGT
Suggested primer 2:CCATGCATTTGTCCGTGTAG