Insertion junction: LMJ.RY0402.103999_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.103999
Chromosome:chromosome 13
Location:3358490
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g586750 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCGATTGGGGTCGTCAATGCCTGCAA
Internal bar code:GAACGACGGGCCCGCCCTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:98.8051
LEAP-Seq n confirming:1075
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTCGTGAAGTTCAAGCG
Suggested primer 2:TCTTCAAGTCGGCTCCAGTT