Insertion junction: LMJ.RY0402.104049_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104049
Chromosome:chromosome 6
Location:5868560
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCCCCGCCCAGCCGCTCTGCGCCCAA
Internal bar code:AGGGAATGTAGGTCGTATGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACGGTAATTGAACCGCT
Suggested primer 2:GTGGATGAGGATGAGGAGGA