Insertion junction: LMJ.RY0402.104070_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.104070
Chromosome:chromosome 7
Location:4213954
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g342050 NPSN1,VTI3 (1 of 1) K08494 - novel plant SNARE (NSPN); Endosomal Qb-SNARE, Npsn-family (plant/protist-specific) (Qb.III.d) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGGTTGCAAGTATGTTCGGAGAGCGG
Internal bar code:CGTCGCGTCTCTTGATATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:919
LEAP-Seq percent confirming:99.2609
LEAP-Seq n confirming:2283
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTGGAGTCGTCAGTCC
Suggested primer 2:CCTTTGTCCCTTCTGTCTGC