Insertion junction: LMJ.RY0402.104098_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104098
Chromosome:chromosome 1
Location:3433689
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g021900 PUS11 (1 of 1) PTHR11142:SF10 - TRNA PSEUDOURIDINE SYNTHASE; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGTCCAGCGGGCGGCCCCGCAGCGCCGC
Internal bar code:GCTATGGGTTGTCTGCGGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:95.098
LEAP-Seq n confirming:194
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCAAGTCATACACCCT
Suggested primer 2:GTTGACACCACTGTTGACGG