Insertion junction: LMJ.RY0402.104284_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.104284
Chromosome:chromosome 9
Location:7210359
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g412350 (1 of 1) PTHR16557:SF4 - 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTTGATACCCAAATGTGCACGTACCCG
Internal bar code:ATCATGTGCGTCACAGGCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:89.2934
LEAP-Seq n confirming:834
LEAP-Seq n nonconfirming:100
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATGTCACCAACGACATC
Suggested primer 2:GGAGATGGGCAGTTGTAGGA