Insertion junction: LMJ.RY0402.104355_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.104355
Chromosome:chromosome 17
Location:3302400
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATATACCGTTACACCTGCTGACGCGC
Internal bar code:AGTCGATTGGGACTCTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:99.7376
LEAP-Seq n confirming:5702
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGCACAGTGTTCTTT
Suggested primer 2:TTTGTGCGCTGTTGGTAAAG