Insertion junction: LMJ.RY0402.104399_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.104399
Chromosome:chromosome 9
Location:5194943
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g399252 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCAGACGGCGTGCCGATAGGGGCAGG
Internal bar code:TGACCTTACAGCTGCATGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:98.8558
LEAP-Seq n confirming:3715
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACCTTCTGGGTGTCGAT
Suggested primer 2:GTTCGAAGACAGCGATGTGA