Insertion junction: LMJ.RY0402.104447_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.104447
Chromosome:chromosome 3
Location:395973
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAATTATGAGTAATTAAGAAGTGAAGG
Internal bar code:TTTACTTGGTTCCGGATTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:97.6303
LEAP-Seq n confirming:412
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCCCCTTCCTTCCTGTC
Suggested primer 2:AGTAGCACCGCTGGCAGTAG