Insertion junction: LMJ.RY0402.104460_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.104460
Chromosome:chromosome 2
Location:5025737
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g104400 (1 of 1) IPR000104//IPR005033 - Antifreeze protein, type I // YEATS 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGCGCTGTTCACACCCCGTGGGTCAC
Internal bar code:GATCGATGCGGCGAAATGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:94.5122
LEAP-Seq n confirming:155
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACGTACAGGAAGCCCAC
Suggested primer 2:CTGGTCGCCATCTGGTAATC