Insertion junction: LMJ.RY0402.104485_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104485
Chromosome:chromosome 10
Location:1347593
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g427850 (1 of 1) IPR000014//IPR000104//IPR013767 - PAS domain // Antifreeze protein, type I // PAS fold gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCCCAACCCAGGCAGTTACCGTACCG
Internal bar code:TCCCTATTGCCGATCCGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:858
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGTGTGTATCTTGGGGT
Suggested primer 2:CACTGTGCTGGGATAGGGTT