Insertion junction: LMJ.RY0402.104498_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104498
Chromosome:chromosome 10
Location:5520978
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g459350 OPR49,RAP5 OctotricoPeptide Repeat protein 49; (1 of 2) IPR000104//IPR013584 - Antifreeze protein, type I // RAP domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCTTGCAGGCGCCACATGATCGCACGG
Internal bar code:AGGTAGGGAGGCGCGCCAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:98.1013
LEAP-Seq n confirming:465
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTAGTTTGGGCTGG
Suggested primer 2:GCAGCTCTAACAGATGCACG