Insertion junction: LMJ.RY0402.104498_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.104498
Chromosome:chromosome 10
Location:5520979
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g459350 OPR49,RAP5 OctotricoPeptide Repeat protein 49; (1 of 2) IPR000104//IPR013584 - Antifreeze protein, type I // RAP domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTCCCGCAGGCTCCCGCGTGCGGATCC
Internal bar code:CGCCTTGCGTGGATAATCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:98.8827
LEAP-Seq n confirming:354
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTAGTTTGGGCTGG
Suggested primer 2:GCAGCTCTAACAGATGCACG