Insertion junction: LMJ.RY0402.104731_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.104731
Chromosome:chromosome 3
Location:1212276
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g149650 CCD1 related to carotenoid 9%252C10-9'%252C10' cleavage dioxygenase; (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCAATCAACACGCATTACCTTCGGCTG
Internal bar code:AGGGTGCTGAAGTTGACTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:99.1663
LEAP-Seq n confirming:4163
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAAAAGGCAGTAGGCAG
Suggested primer 2:CAAGTCATGTGGGTGTGAGG