Insertion junction: LMJ.RY0402.104783_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104783
Chromosome:chromosome 6
Location:6654606
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g294050 (1 of 2) PTHR22640:SF2 - STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGAGTACCGCCTGCTGCCGGACCTGC
Internal bar code:GGGTATGACAGAAAACGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:59.2262
LEAP-Seq n confirming:199
LEAP-Seq n nonconfirming:137
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCAGAACAGCAGGTCAA
Suggested primer 2:GCGAAAGCTCCAGACAATTC