Insertion junction: LMJ.RY0402.104831_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104831
Chromosome:chromosome 9
Location:616179
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g403500 (1 of 1) PF12796//PF13637//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCCAGAAATCATTTTCATTGATGTTAG
Internal bar code:GTATCGACCACATGTGAGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:95.4071
LEAP-Seq n confirming:914
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACGTTGACACGAATGG
Suggested primer 2:ATGCAACAAGTCAGTCGCAG