Insertion junction: LMJ.RY0402.104905_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.104905
Chromosome:chromosome 3
Location:628581
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g145747 SHK7,SHKH1 (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase; Chorismate synthase gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGCCCCGCTTGCAGAGGCCCGCCAAAA
Internal bar code:ATGGTCGTCCGTCAAAGGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:99.0665
LEAP-Seq n confirming:849
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCAACGGGGCTCAATAC
Suggested primer 2:TGTGTGTGGATATGGGAGGA