Insertion junction: LMJ.RY0402.104981_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.104981
Chromosome:chromosome 3
Location:8320738
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g199050 (1 of 1) IPR000595//IPR000719//IPR000961//IPR002290//IPR011009//IPR014710//IPR018490//IPR020635//IPR027916 - Cyclic nucleotide-binding domain // Protein kinase domain // AGC-kinase, C-terminal // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // RmlC-like jelly roll fold // Cyclic nucleotide-binding-like // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCTCTGCTTCTGGTCGGCGACAGCGA
Internal bar code:GATCTTACCTGCGGTTGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:94.8276
LEAP-Seq n confirming:1375
LEAP-Seq n nonconfirming:75
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTCCGGTGTAACGCTTC
Suggested primer 2:CATCAGGCAGTACAAGGGGT