Insertion junction: LMJ.RY0402.105034_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.105034
Chromosome:chromosome 7
Location:4127140
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g342800 CGL16 (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGACTGGTGCGCTGCTGGCCGGCACCAC
Internal bar code:CATGCGTTAGGCCGGGGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:391
LEAP-Seq percent confirming:35.6781
LEAP-Seq n confirming:19948
LEAP-Seq n nonconfirming:35963
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGAGCGAGATACAGGTG
Suggested primer 2:TGGTTCAGTGAGTAGCCGTG