Insertion junction: LMJ.RY0402.105149_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.105149
Chromosome:chromosome 17
Location:2947972
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g719950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCAAAGGCCGGGCCACGGCTGGGCCCG
Internal bar code:AGGGCCCCGCGATCTGTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:88.3441
LEAP-Seq n confirming:1099
LEAP-Seq n nonconfirming:145
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGGGTTGTCCTGTAGT
Suggested primer 2:CGCACCGTGAAGTGAGAGTA