Insertion junction: LMJ.RY0402.105162_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.105162
Chromosome:chromosome 5
Location:1046595
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g246300 (1 of 1) PTHR13554//PTHR13554:SF10 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED // 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGGTGCGGCGAGTGTGGCGGCGAAGG
Internal bar code:GCTCGGATCACCGACGGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:99.7037
LEAP-Seq n confirming:673
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGTTGCTTTGCTTTGG
Suggested primer 2:GTGTCATTCGCTGCTGTGTT