Insertion junction: LMJ.RY0402.105435_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.105435
Chromosome:chromosome 5
Location:977076
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g246750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCCGCATTCATAGCTCCGTGTCTCCGT
Internal bar code:GGCGGGTGGCGAAGTGGATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:99.2906
LEAP-Seq n confirming:4339
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCCGTCGTAGCTGACT
Suggested primer 2:AGAAGCAGAAGCAGCAGGAG