Insertion junction: LMJ.RY0402.105470_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.105470
Chromosome:chromosome 3
Location:8203473
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED 3'UTR|3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTCAGGTACAATTAAATGATTGATTAA
Internal bar code:GAAGCCCACTGTACATGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:99.6096
LEAP-Seq n confirming:1531
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTACACCGCTTCCTGTC
Suggested primer 2:CTAATACAGAAGCGGAGGCG