Insertion junction: LMJ.RY0402.105492_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.105492
Chromosome:chromosome 16
Location:2103587
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g657750 CCD2 Carotenoid cleavage dioxygenase; (1 of 3) IPR005404 - Potassium channel, voltage dependent, Kv3.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGTGGTAGCGCGGGGCAGCAGTCATCC
Internal bar code:GTTTTAACTGGTAGGCCTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:205
LEAP-Seq percent confirming:98.1731
LEAP-Seq n confirming:1021
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTTATGCACCGGACTTC
Suggested primer 2:CCAGCTACGATGCAGTTGAA