Insertion junction: LMJ.RY0402.105612_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.105612
Chromosome:chromosome 9
Location:6239593
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g406300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTGCGTAGTCACTAGCTAGTCAGCTT
Internal bar code:TCGATTGGCCGCGCGGGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:94.4363
LEAP-Seq n confirming:645
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACTTCATTCCCTGTTGT
Suggested primer 2:GTGTTTTGTGTCAGCATGGG