Insertion junction: LMJ.RY0402.105635_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.105635
Chromosome:chromosome 4
Location:1846346
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g211600 snRK1,CKIN1,SNF1,SNRK1A (1 of 1) PTHR24343//PTHR24343:SF183 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGAGGAGACGCGGCGTGTGCGGGGGCG
Internal bar code:CCTATACATGCTTGGCCGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:99.1641
LEAP-Seq n confirming:3796
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCGCACACCACATACT
Suggested primer 2:ACCCATCATAACCCTCCTCC