Insertion junction: LMJ.RY0402.105712_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.105712
Chromosome:chromosome 17
Location:3993699
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g728864 OPR105 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 105 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGACGTGGGGGGCATTCGGGCAGTTT
Internal bar code:CCTGACCTTTGGAGCCGTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:96.794
LEAP-Seq n confirming:19866
LEAP-Seq n nonconfirming:658
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGCTGGCATTCTTCTC
Suggested primer 2:AATGACGAGGACAAACCGAG