Insertion junction: LMJ.RY0402.105868_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.105868
Chromosome:chromosome 13
Location:3919816
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAATGCAAGTAACATGTGCGCGGCACGG
Internal bar code:TGAAATGTGGGGCCGTTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:99.556
LEAP-Seq n confirming:3139
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCTCTCGTCTGCTTACC
Suggested primer 2:TGGAGTGAAGACACAGTCGC