Insertion junction: LMJ.RY0402.105937_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.105937
Chromosome:chromosome 16
Location:1108573
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAACTGAGACCCAGGGGTTTGTGGGCTG
Internal bar code:GGGTGGTTTCGCTCAGCGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:99.8178
LEAP-Seq n confirming:1096
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCACAACACACCATGAG
Suggested primer 2:CACACATGCTAACCGTCACC