Insertion junction: LMJ.RY0402.105946_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.105946
Chromosome:chromosome 17
Location:3701569
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g726983 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATTTACATTGTGGCAAAGGCTGTCACAT
Internal bar code:ATACTCAGAGGTCCTAAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:99.5921
LEAP-Seq n confirming:1709
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAACGTCAAGGCAGATA
Suggested primer 2:TACGGGCCCATAACTAGCAC