Insertion junction: LMJ.RY0402.105970_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.105970
Chromosome:chromosome 3
Location:9042343
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGATGAAGCAAAAGTATGCGGCTAAAC
Internal bar code:CGTATGGCAAGAGTCGTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:99.0512
LEAP-Seq n confirming:1566
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTGTTCCTGATCGTTTG
Suggested primer 2:GACGTTTCACTGACGAGGGT