Insertion junction: LMJ.RY0402.105979_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.105979
Chromosome:chromosome 1
Location:5564254
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g039500 FAP89 Flagellar Associated Protein 89; (1 of 3) PTHR22847:SF361 - JOUBERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTCGAACGCACACGCACACTCCTGTGC
Internal bar code:GTGCTCGAATATCCATCCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:23.3083
LEAP-Seq n confirming:620
LEAP-Seq n nonconfirming:2040
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGATAGCTGAAGATGGCG
Suggested primer 2:CAATTATGGCCAGCCACTTT