Insertion junction: LMJ.RY0402.106015_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.106015
Chromosome:chromosome 9
Location:6640223
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g408676 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCCCCGCAGGCTTGCGAGAGATTGCGG
Internal bar code:GCTCGAGGTCCCTGAGGACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:91.5388
LEAP-Seq n confirming:3700
LEAP-Seq n nonconfirming:342
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACACAATAGGCATCGAGCG
Suggested primer 2:GCTGTAGGAGCGGTAGCATT