Insertion junction: LMJ.RY0402.106078_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.106078
Chromosome:chromosome 10
Location:1689073
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g430150 REP27,LPA1 (1 of 1) PF11998//PF13414 - Protein of unknown function (DUF3493) (DUF3493) // TPR repeat (TPR_11); Low Photosystem II Accumulation 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGTCACTGCAACAGCCATCTCTGGATG
Internal bar code:ATGTTTCGGAGCGTGGGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:99.2932
LEAP-Seq n confirming:2950
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGAATGTGGCAATGTG
Suggested primer 2:CCCAACTGCTACATCCAGGT