Insertion junction: LMJ.RY0402.106130_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.106130
Chromosome:chromosome 14
Location:799332
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron|outside_mRNA
Cre14.g613075 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCGCACGCGCCGCATGTGTGTACTGAA
Internal bar code:GGTGATTTTTAGTTAGTCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:77.4451
LEAP-Seq n confirming:388
LEAP-Seq n nonconfirming:113
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATCAATCAACTACCGCC
Suggested primer 2:CTTGTAGTGGAGGAGCAGGC