Insertion junction: LMJ.RY0402.106170_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.106170
Chromosome:chromosome 2
Location:2739357
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTCGTGACTGTGGGGTGGGGGCGTGTG
Internal bar code:CCGGGTCGCCTGGGCGGTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:97.7186
LEAP-Seq n confirming:514
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGCGACAGAGAAAAGGA
Suggested primer 2:CTGCTTGATGGTCGTCTCAA