Insertion junction: LMJ.RY0402.106492_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.106492
Chromosome:chromosome 12
Location:3943446
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g516300 CGL154 Conserved in the Green Lineage; (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCCTTTTGTGAAGGCGCACACGGCGC
Internal bar code:AGGCCCAGCAGGGTTGCCGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:99.0633
LEAP-Seq n confirming:2221
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGTCGTTTGCACTCTTG
Suggested primer 2:CGTGTGTGTTTTGATGGACC