Insertion junction: LMJ.RY0402.106587_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.106587
Chromosome:chromosome 11
Location:758093
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467632 (1 of 1) IPR008979//IPR017853 - Galactose-binding domain-like // Glycoside hydrolase superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTGTGCACTGCAGCTAGCCCCGGTTCC
Internal bar code:ATTGGCTCCCCGCGCTCCCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:857
LEAP-Seq percent confirming:99.3671
LEAP-Seq n confirming:314
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGTACGGGGTGTGAAAGC
Suggested primer 2:AGTCGATGTCCCAGTCCAAC